Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5V1Z

Crystal structure of the RPN13 PRU-RPN2 (932-953)-ubiquitin complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyCCD
Collection date2012-02-17
DetectorADSC QUANTUM 315r
Wavelength(s)1.127
Spacegroup nameP 31
Unit cell lengths100.852, 100.852, 37.571
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution33.012 - 2.000
R-factor0.1552
Rwork0.146
R-free0.18170
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB entries 2R2Y & 1CMX
RMSD bond length0.009
RMSD bond angle0.887
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.0002.030
High resolution limit [Å]2.0002.000
Number of reflections288752748
<I/σ(I)>162.5
Completeness [%]100.0100
Redundancy4.74.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62930.1 M sodium acetate, pH 4.6, 22.5% PEG3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon