5V1Y
Crystal structure of the ternary RPN13 PRU-RPN2 (940-953)-ubiquitin complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X29A |
| Synchrotron site | NSLS |
| Beamline | X29A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-04-20 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 1.075 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 36.129, 96.098, 57.605 |
| Unit cell angles | 90.00, 96.38, 90.00 |
Refinement procedure
| Resolution | 36.804 - 1.421 |
| R-factor | 0.1413 |
| Rwork | 0.140 |
| R-free | 0.17480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB entries 2R2Y & 1CMX |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.984 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.470 |
| High resolution limit [Å] | 1.420 | 1.420 |
| Number of reflections | 72405 | 2526 |
| <I/σ(I)> | 24.8 | 5.2 |
| Completeness [%] | 98.0 | 93 |
| Redundancy | 7.6 | 7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 277 | 0.1 M citric acid, pH 4.6, 20% PEG6000 |






