5UZA
Adenine riboswitch aptamer domain labelled with iodo-uridine by position-selective labelling of RNA (PLOR)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-10-18 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.55 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 48.985, 151.575, 24.735 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.611 - 2.220 |
| R-factor | 0.217 |
| Rwork | 0.215 |
| R-free | 0.25090 |
| Structure solution method | SAD |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.386 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | SHELXD |
| Refinement software | PHENIX (dev_2447) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 46.611 | 50.000 | 2.300 |
| High resolution limit [Å] | 2.220 | 4.780 | 2.220 |
| Rmerge | 0.048 | 0.029 | 0.658 |
| Rmeas | 0.051 | 0.031 | 0.729 |
| Rpim | 0.017 | 0.011 | 0.307 |
| Number of reflections | 17080 | ||
| <I/σ(I)> | 12 | ||
| Completeness [%] | 99.7 | 98.1 | 99.3 |
| Redundancy | 8.5 | 8 | 5.2 |
| CC(1/2) | 0.998 | 0.775 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 277 | 50mM Tris-HCl (pH:8.5), 100mM KCl, 10mM MgCl2 and 30% Polyethylene Glycol 400 |






