5UW0
Activated state yGsy2p in complex with UDP-2-fluoro-2-deoxy-glucose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Detector technology | PIXEL |
Collection date | 2015-03-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.979 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 193.516, 204.705, 206.514 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 145.380 - 2.730 |
R-factor | 0.20012 |
Rwork | 0.199 |
R-free | 0.22449 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kqm |
RMSD bond length | 0.010 |
RMSD bond angle | 1.384 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 145.380 |
High resolution limit [Å] | 2.730 |
Rmerge | 0.055 |
Rpim | 0.046 |
Number of reflections | 102119 |
<I/σ(I)> | 11.97 |
Completeness [%] | 99.4 |
Redundancy | 4.21 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 25 - 30 % Peg 300, 0.1 M Bis-Tris pH 6.1-6.4, 25 mM G-6-P, 10 mM UDP-FDG |