5UTH
Crystal structure of thioredoxin reductase from Mycobacterium smegmatis in complex with FAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-22 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 69.280, 69.280, 153.800 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.976 - 1.950 |
R-factor | 0.1691 |
Rwork | 0.167 |
R-free | 0.20190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2a87 as found by morda |
RMSD bond length | 0.006 |
RMSD bond angle | 0.802 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.976 | 50.000 | 2.000 |
High resolution limit [Å] | 1.950 | 8.720 | 1.950 |
Rmerge | 0.059 | 0.021 | 0.398 |
Rmeas | 0.062 | 0.022 | 0.452 |
Number of reflections | 31655 | 425 | 2154 |
<I/σ(I)> | 24.69 | 67.18 | 3.27 |
Completeness [%] | 98.8 | 97 | 93.7 |
Redundancy | 9.399 | 8.887 | 4.398 |
CC(1/2) | 1.000 | 1.000 | 0.937 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 290 | AnatraceTop96 screen, E1: 2M Ammonium sulfate, 100mM BisTris pH 5.5: MysmA.00058.a.B1.PS38133 at 22.8mg/ml + 3mM NADP. Over night soak with 5x drop volume of FAD in reservoir: cryo: 3M Ammonium sulfate; tray 248209h3, puck xtp3-5. |