Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5USE

5-Se-T4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2016-10-17
DetectorADSC QUANTUM 315r
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths80.912, 37.560, 62.258
Unit cell angles90.00, 96.17, 90.00
Refinement procedure
Resolution30.949 - 1.730
R-factor0.19419
Rwork0.192
R-free0.23398
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2g8u
RMSD bond length0.021
RMSD bond angle2.039
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.730
Rpim0.039
Number of reflections19601
<I/σ(I)>53.7
Completeness [%]99.8
Redundancy6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52930.1M MES pH 6.5, 12%(w/v) PEG 20000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon