5UNM
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, substrate free form with flexible loop
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-05-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9774 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 107.339, 107.339, 318.902 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.829 - 2.580 |
R-factor | 0.1917 |
Rwork | 0.189 |
R-free | 0.24260 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.803 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.25) |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX (1.11.1-2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.830 | 48.830 | 2.650 |
High resolution limit [Å] | 2.580 | 11.230 | 2.580 |
Rmerge | 0.138 | 0.039 | 0.988 |
Rmeas | 0.144 | 0.041 | 1.046 |
Rpim | 0.043 | 0.013 | 0.334 |
Total number of observations | 644043 | ||
Number of reflections | 59917 | ||
<I/σ(I)> | 15.4 | ||
Completeness [%] | 99.8 | 98.6 | 98.5 |
Redundancy | 10.7 | 9.2 | 9.3 |
CC(1/2) | 0.998 | 0.999 | 0.670 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294.15 | 5 ul ~25 mg/ml LarE (100 mM Tris-HCl pH 7.5, 300 mM NaCl) mixed with 5 ul reservoir solution. Hanging drop reservoir contained 100 ul of 21% Tacsimate pH 6.1. |