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5UNM

LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, substrate free form with flexible loop

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyCCD
Collection date2016-05-21
DetectorADSC QUANTUM 315r
Wavelength(s)0.9774
Spacegroup nameP 41 2 2
Unit cell lengths107.339, 107.339, 318.902
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.829 - 2.580
R-factor0.1917
Rwork0.189
R-free0.24260
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.803
Data reduction softwareXDS
Data scaling softwareAimless (0.5.25)
Phasing softwarePHASER (2.6.0)
Refinement softwarePHENIX (1.11.1-2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.83048.8302.650
High resolution limit [Å]2.58011.2302.580
Rmerge0.1380.0390.988
Rmeas0.1440.0411.046
Rpim0.0430.0130.334
Total number of observations644043
Number of reflections59917
<I/σ(I)>15.4
Completeness [%]99.898.698.5
Redundancy10.79.29.3
CC(1/2)0.9980.9990.670
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5294.155 ul ~25 mg/ml LarE (100 mM Tris-HCl pH 7.5, 300 mM NaCl) mixed with 5 ul reservoir solution. Hanging drop reservoir contained 100 ul of 21% Tacsimate pH 6.1.

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PDB entries from 2024-05-15

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