5UNJ
Structure of Human Liver Receptor Homolog 1 in complex with PGC1a and RJW100
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-18 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 66.180, 84.027, 45.355 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.014 - 1.959 |
R-factor | 0.2012 |
Rwork | 0.199 |
R-free | 0.22650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5l11 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.489 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.10.1_2155) |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
High resolution limit [Å] | 1.950 | 4.200 | 1.950 |
Rmerge | 0.099 | 0.071 | 0.384 |
Rmeas | 0.108 | 0.077 | 0.425 |
Rpim | 0.042 | 0.030 | 0.176 |
Total number of observations | 111677 | ||
Number of reflections | 18170 | ||
<I/σ(I)> | 7 | ||
Completeness [%] | 96.8 | 99.9 | 83.8 |
Redundancy | 6.1 | 6.7 | 5 |
CC(1/2) | 0.996 | 0.915 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.05M Sodium acetate, pH 4.6; PEG4000 14%, glycerol 15-21% |