5UMY
Crystal structure of TnmS3 in complex with tiancimycin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-03-21 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.790, 67.870, 84.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.620 - 1.780 |
R-factor | 0.17812 |
Rwork | 0.176 |
R-free | 0.22736 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ump |
RMSD bond length | 0.018 |
RMSD bond angle | 1.808 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP (5.8.0155) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.620 | 1.880 |
High resolution limit [Å] | 1.780 | 1.780 |
Rmerge | 0.060 | 0.326 |
Rmeas | 0.078 | 0.423 |
Rpim | 0.037 | 0.204 |
Number of reflections | 25746 | 21445 |
<I/σ(I)> | 11.3 | 3.8 |
Completeness [%] | 99.3 | 95.3 |
Redundancy | 4.1 | 4 |
CC(1/2) | 0.997 | 0.877 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 100 mM ammonium acetate, 100 mM bis-tris, and 17% w/v polyethylene glycol 3350 |