5UM6
Crystal Structure of S. pombe Uba1 in a closed conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 108 |
Detector technology | CCD |
Collection date | 2015-07-20 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.08 |
Spacegroup name | P 21 3 |
Unit cell lengths | 145.102, 145.102, 145.102 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.244 - 2.794 |
R-factor | 0.2075 |
Rwork | 0.206 |
R-free | 0.23950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ii3 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.508 |
Data reduction software | HKL-2000 (v705b) |
Data scaling software | HKL-2000 (v705b) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.794 | 2.790 |
Rmerge | 0.066 | 0.726 |
Rpim | 0.200 | |
Number of reflections | 25520 | |
<I/σ(I)> | 39.2 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.3 | 12.5 |
CC(1/2) | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 285 | 0.1M Sodium Citrate pH5.6-6.0 1.0-1.2 Ammonium Sulfate |