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5UJK

Malate dehydrogenase from Methylobacterium extorquens, complexed with NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2015-02-10
DetectorRAYONIX MX-300
Wavelength(s)0.97949
Spacegroup nameP 64 2 2
Unit cell lengths108.189, 108.189, 104.321
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution54.090 - 1.530
R-factor0.12628
Rwork0.124
R-free0.17726
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4rop
RMSD bond length0.019
RMSD bond angle1.791
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]54.0901.560
High resolution limit [Å]1.5301.530
Rmerge0.1080.800
Rpim0.0330.357
Number of reflections546962651
<I/σ(I)>12.12.2
Completeness [%]100.099.8
Redundancy10.69
CC(1/2)0.9980.733
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529825-28% PEG400, 180-220mM CaCl2, 0.1M Hepes pH 7.5, soaked with 1mM NAD

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