5UE8
The crystal structure of Munc13-1 C1C2BMUN domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-02-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97931 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 176.145, 86.351, 202.142 |
Unit cell angles | 90.00, 115.54, 90.00 |
Refinement procedure
Resolution | 45.598 - 3.350 |
R-factor | 0.2542 |
Rwork | 0.252 |
R-free | 0.29000 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.610 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.410 |
High resolution limit [Å] | 3.350 | 9.080 | 3.350 |
Rmerge | 0.056 | 0.016 | 0.692 |
Rmeas | 0.064 | 0.019 | 0.798 |
Rpim | 0.031 | 0.009 | 0.388 |
Total number of observations | 147746 | ||
Number of reflections | 37636 | ||
<I/σ(I)> | 9.9 | ||
Completeness [%] | 93.9 | 95.6 | 68.9 |
Redundancy | 3.9 | 3.8 | 3.3 |
CC(1/2) | 0.998 | 0.809 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M LiCl, 0.1 M Tris-HCl pH 8.0, 0.15 M NaCl, 12% PEG 10,000, 10% glycerol, 5 mM TCEP, 25% ethylene glycol |