Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5U8H

DNA Polymerase Beta G231D crystallized in PEG 400

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]104
Detector technologyIMAGE PLATE
Collection date2012-12-10
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths54.085, 78.772, 54.686
Unit cell angles90.00, 104.45, 90.00
Refinement procedure
Resolution14.000 - 2.155
R-factor0.1872
Rwork0.182
R-free0.23380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3isb
RMSD bond length0.002
RMSD bond angle0.531
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.3.0)
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]14.00014.0002.230
High resolution limit [Å]2.1504.5802.150
Rmerge0.0940.0480.367
Rmeas0.103
Rpim0.040
Total number of observations139223
Number of reflections23423
<I/σ(I)>13.5
Completeness [%]97.610080.3
Redundancy5.97.12.1
CC(1/2)0.9990.805
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529122% PEG 400, 100 mM potassium sodium tartrate, 1% isopropanol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon