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5TZR

GPR40 in complex with partial agonist MK-8666

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2015-03-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.00
Spacegroup nameC 1 2 1
Unit cell lengths100.620, 62.600, 106.150
Unit cell angles90.00, 108.93, 90.00
Refinement procedure
Resolution28.170 - 2.200
R-factor0.201
Rwork0.200
R-free0.22800
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)4phu
RMSD bond length0.010
RMSD bond angle1.000
Data reduction softwareHKL-2000 (705)
Data scaling softwareHKL-2000 (705)
Phasing softwareREFMAC (5.8.0123)
Refinement softwareBUSTER (2.11.6)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.140
High resolution limit [Å]2.2002.100
Rmerge0.507
Number of reflections30519
Completeness [%]48.2
Redundancy2.9
CC(1/2)0.788
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE7.729325-28%PEG 400, 0.2M sodium malonate, 0.1M Tris pH7.7

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PDB entries from 2024-05-15

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