5TZG
Structure of the BldD CTD(D116A)-(c-di-GMP)2, form 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-25 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 82.098, 82.098, 59.118 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.421 - 2.500 |
R-factor | 0.2025 |
Rwork | 0.197 |
R-free | 0.24750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tzd |
RMSD bond length | 0.007 |
RMSD bond angle | 1.383 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.100 | 2.740 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.158 | |
Rpim | 0.023 | |
Number of reflections | 13016 | |
<I/σ(I)> | 21.4 | 6.5 |
Completeness [%] | 97.2 | 97.1 |
Redundancy | 5.5 | 5.5 |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 20% PEG 3000, 0.1 M sodium acetate pH 4.6, 0.1 M zinc chloride |