5TW7
Crystal structure of a GMP synthase (glutamine-hydrolyzing) from Neisseria gonorrhoeae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-07-20 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 |
Unit cell lengths | 108.390, 109.350, 109.910 |
Unit cell angles | 115.33, 100.00, 108.06 |
Refinement procedure
Resolution | 46.116 - 2.350 |
R-factor | 0.1875 |
Rwork | 0.186 |
R-free | 0.22320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gpm |
RMSD bond length | 0.008 |
RMSD bond angle | 0.894 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.116 | 46.116 | 2.410 |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.075 | 0.026 | 0.517 |
Rmeas | 0.087 | ||
Total number of observations | 644834 | ||
Number of reflections | 166001 | 12193 | |
<I/σ(I)> | 14.95 | 41.02 | 2.88 |
Completeness [%] | 98.1 | 95.2 | 97.6 |
CC(1/2) | 0.997 | 0.998 | 0.803 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | NegoA.17876.a.B1.PW39722 at 25.5 mg/mL against MCSG1 screen condition C6: 0.2 M magnesium chloride, 0.1 M HEPES, pH 7.5, 30% PEG400 |