5TT8
Crystal structure of the complex of Helicobacter pylori alpha-carbonic anhydrase with benzolamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-09 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.240, 134.400, 165.280 |
Unit cell angles | 90.00, 90.04, 90.00 |
Refinement procedure
Resolution | 41.320 - 2.400 |
R-factor | 0.2031 |
Rwork | 0.198 |
R-free | 0.23130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ygf |
RMSD bond length | 0.011 |
RMSD bond angle | 1.550 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 165.280 | 42.605 | 2.530 |
High resolution limit [Å] | 2.400 | 7.590 | 2.400 |
Rmerge | 0.046 | 0.319 | |
Rmeas | 0.096 | 0.058 | 0.398 |
Rpim | 0.056 | 0.035 | 0.234 |
Total number of observations | 129205 | 3764 | 18609 |
Number of reflections | 55072 | ||
<I/σ(I)> | 8 | 17.8 | 2.7 |
Completeness [%] | 78.3 | 68.5 | 81.1 |
Redundancy | 2.3 | 2.4 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 12% (w/v) PEG 1.5K, 100 mM di-basic ammonium citrate, 1 mM zinc chloride |