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5TPB

Binding domain of BoNT/A complexed with ganglioside variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-03-15
DetectorPSI PILATUS 6M
Wavelength(s)0.91841
Spacegroup nameP 1 21 1
Unit cell lengths65.515, 104.330, 69.406
Unit cell angles90.00, 115.97, 90.00
Refinement procedure
Resolution39.050 - 2.600
R-factor0.223
Rwork0.222
R-free0.23960
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.210
Data scaling softwareSCALA (0.2.17)
Phasing softwarePHASER (2.5.6)
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.05039.0502.720
High resolution limit [Å]2.6009.0102.600
Rmerge0.1160.0480.577
Rmeas0.1380.0580.694
Rpim0.0750.0320.381
Total number of observations86881203810122
Number of reflections25875
<I/σ(I)>6.214.61.7
Completeness [%]99.898.699.7
Redundancy3.43.23.2
CC(1/2)0.9910.9950.686
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529320% PEG3350, 0.2 M potassium thiocyanate, 0.1 M BisTris propane pH 6.5

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PDB entries from 2024-05-15

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