Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5TMZ

Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the estradiol derivative, (8S,9S,13S,14S,17S)-16-(3-methoxybenzyl)-13-methyl-7,8,9,11,12,13,14,15,16,17-decahydro-6H-cyclopenta[a]phenanthrene-3,17-diol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-04-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979
Spacegroup nameP 1 21 1
Unit cell lengths54.630, 82.660, 58.460
Unit cell angles90.00, 110.83, 90.00
Refinement procedure
Resolution46.443 - 2.207
R-factor0.1927
Rwork0.188
R-free0.24230
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.449
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.240
High resolution limit [Å]2.2005.9702.200
Rmerge0.1170.0800.559
Rmeas0.128
Rpim0.049
Total number of observations162386
Number of reflections24431
<I/σ(I)>5.2
Completeness [%]99.498.699.1
Redundancy6.66.46.3
CC(1/2)0.9950.915
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.329415% PEG 3350, 0.05M MgCl2, 0.067M NaCl, 0.1M Tris

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon