Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5TDC

Crystal structure of the human UBR-box domain from UBR1 in complex with monomethylated arginine peptide.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
Collection date2010-10-20
DetectorADSC QUANTUM 210
Wavelength(s)0.9769
Spacegroup nameP 21 21 21
Unit cell lengths47.274, 49.036, 53.634
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.736 - 1.607
R-factor0.1505
Rwork0.149
R-free0.18040
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ny1
RMSD bond length0.009
RMSD bond angle1.050
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.7361.630
High resolution limit [Å]1.6071.607
Number of reflections16360
<I/σ(I)>13.26
Completeness [%]97.486
Redundancy2.41.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2932.2 M (NH4)2SO4, 0.2 K/Na Tartrate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon