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5TD2

Structure-based optimization of 1H-imidazole-2-carboxamides as Axl kinase inhibitors utilizing a Mer mutant surrogate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]100
Detector technologyCCD
Collection date2010-05-20
DetectorADSC QUANTUM 315r
Wavelength(s)0.9764848
Spacegroup nameP 1 21 1
Unit cell lengths51.157, 91.942, 69.655
Unit cell angles90.00, 99.51, 90.00
Refinement procedure
Resolution30.000 - 2.680
R-factor0.2507
Rwork0.248
R-free0.29990
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.174
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.730
High resolution limit [Å]2.6807.2702.680
Rmerge0.1030.0580.439
Total number of observations48133
Number of reflections16671
<I/σ(I)>9.5
Completeness [%]92.895.362.4
Redundancy2.92.92.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.529329% PEG 400 0.2M MgCl2 0.1M Tris pH 8.5

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PDB entries from 2024-05-15

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