Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5T7B

Argonaute-2 - 5'-(E)-vinylphosphonate 2'-O-methyl-uridine modified mrTTR guide RNA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-11-30
DetectorADSC QUANTUM 315r
Wavelength(s)0.97934
Spacegroup nameP 1 21 1
Unit cell lengths63.207, 108.306, 68.821
Unit cell angles90.00, 106.62, 90.00
Refinement procedure
Resolution65.946 - 2.529
R-factor0.1957
Rwork0.194
R-free0.23830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4f3t
RMSD bond length0.003
RMSD bond angle0.569
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]65.9502.537
High resolution limit [Å]2.5292.529
Rmerge0.0650.655
Number of reflections27742
<I/σ(I)>14.22.2
Completeness [%]93.098.9
Redundancy3.23.3
CC(1/2)0.9980.695
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION290100 mM Tris pH=9.0, 10% PEG 3350 (w/v), 8% 2-propanol (v/v), 0.12 M phenol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon