5T4B
Human DPP4 in complex with a ligand 34a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2010-08-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 117.610, 125.680, 137.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.050 - 1.760 |
R-factor | 0.1597 |
Rwork | 0.158 |
R-free | 0.18580 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1x70 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.030 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | REFMAC |
Refinement software | BUSTER (2.9.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 55.000 | 54.048 | 1.850 |
High resolution limit [Å] | 1.760 | 5.560 | 1.760 |
Rmerge | 0.029 | 0.488 | |
Number of reflections | 200317 | ||
<I/σ(I)> | 18.4 | 19.7 | 1.6 |
Completeness [%] | 99.4 | 99.8 | 98.8 |
Redundancy | 6.7 | 6.4 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 0.27-0.30 M sodium acetate 17-18% polyethylene glycol 3350 0.1 M tris hydrochloride pH 8.0 |