5SZO
Protocadherin Gamma B7 extracellular cadherin domains 1-4 P41212 crystal form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97930 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 97.150, 97.150, 312.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.930 - 3.612 |
R-factor | 0.244 |
Rwork | 0.242 |
R-free | 0.27870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zpl 4zpm 4zpo 4zps 5dzv 5dzx 4zi9 4zi8 5zsm and 5SZN |
RMSD bond length | 0.003 |
RMSD bond angle | 0.588 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 104.130 | 3.930 |
High resolution limit [Å] | 3.590 | 3.590 |
Rmerge | 0.183 | 3.722 |
Number of reflections | 18347 | |
<I/σ(I)> | 9 | 1 |
Completeness [%] | 99.6 | 98.7 |
Redundancy | 12.5 | 12.3 |
CC(1/2) | 1.000 | 0.741 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 8.5 | 295 | 0.1 M Tris-Cl pH 8.5, 0.2 M trimethylamine N-oxide, 3% dextran sulfate sodium salt 5000, 17% (w/v) PEG2000MME |