Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5SZO

Protocadherin Gamma B7 extracellular cadherin domains 1-4 P41212 crystal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2015-10-25
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97930
Spacegroup nameP 41 21 2
Unit cell lengths97.150, 97.150, 312.390
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.930 - 3.612
R-factor0.244
Rwork0.242
R-free0.27870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4zpl 4zpm 4zpo 4zps 5dzv 5dzx 4zi9 4zi8 5zsm and 5SZN
RMSD bond length0.003
RMSD bond angle0.588
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]104.1303.930
High resolution limit [Å]3.5903.590
Rmerge0.1833.722
Number of reflections18347
<I/σ(I)>91
Completeness [%]99.698.7
Redundancy12.512.3
CC(1/2)1.0000.741
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE8.52950.1 M Tris-Cl pH 8.5, 0.2 M trimethylamine N-oxide, 3% dextran sulfate sodium salt 5000, 17% (w/v) PEG2000MME

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon