5SS3
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINCnu000001eLaQ
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-1 |
| Synchrotron site | SSRL |
| Beamline | BL12-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-02-20 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.88557 |
| Spacegroup name | P 43 |
| Unit cell lengths | 88.870, 88.870, 39.211 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.870 - 1.150 |
| R-factor | 0.1565 |
| Rwork | 0.155 |
| R-free | 0.17960 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | XDS (Jan 10, 2022) |
| Data scaling software | XSCALE |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 35.870 | 35.870 | 1.220 |
| High resolution limit [Å] | 1.150 | 3.450 | 1.150 |
| Rmerge | 0.101 | 0.068 | 1.003 |
| Rmeas | 0.110 | 0.074 | 1.089 |
| Total number of observations | 719651 | ||
| Number of reflections | 108401 | 4215 | 17420 |
| <I/σ(I)> | 7.65 | 20.22 | 1.21 |
| Completeness [%] | 99.9 | 99.9 | 99.8 |
| Redundancy | 6.639 | 6.755 | 6.643 |
| CC(1/2) | 0.997 | 0.996 | 0.862 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 100 mM CHES, 28% PEG 3000 |






