5SB5
Tubulin-todalam-9-complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-23 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00003 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.810, 157.711, 180.536 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.550 - 2.310 |
R-factor | 0.1898 |
Rwork | 0.188 |
R-free | 0.22040 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5lxt |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.19.1_4122) |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.550 | 49.550 | 2.370 |
High resolution limit [Å] | 2.310 | 10.320 | 2.310 |
Rmerge | 0.190 | 0.049 | 1.858 |
Rmeas | 0.197 | 0.051 | 1.927 |
Total number of observations | 1809337 | ||
Number of reflections | 131912 | 1637 | 9601 |
<I/σ(I)> | 11.45 | 42.41 | 1.45 |
Completeness [%] | 99.9 | 98.7 | 99.5 |
Redundancy | 13.716 | 12.579 | 14.019 |
CC(1/2) | 0.998 | 0.998 | 0.583 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 2% PEG 4K, 4% glycerol, 30 mM MgCl2, 30 mM CaCl2, 0.1 M MES/Imidazole, 5 mM L-tyrosine |