5RBT
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library C11b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.268, 73.162, 52.633 |
Unit cell angles | 90.00, 109.25, 90.00 |
Refinement procedure
Resolution | 49.740 - 1.120 |
R-factor | 0.1641 |
Rwork | 0.164 |
R-free | 0.16408 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.014 |
RMSD bond angle | 2.101 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.740 | 50.000 | 1.190 |
High resolution limit [Å] | 1.120 | 3.360 | 1.120 |
Rmerge | 0.077 | 0.049 | 1.351 |
Rmeas | 0.084 | 0.053 | 1.471 |
Total number of observations | 817360 | ||
Number of reflections | 115210 | 4654 | 18593 |
<I/σ(I)> | 10.39 | 35.56 | 1.06 |
Completeness [%] | 98.8 | 0.988 | 0.934 |
Redundancy | 6.713 | 6.51 | 6.01 |
CC(1/2) | 0.998 | 0.997 | 0.391 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |