5R2C
PanDDA analysis group deposition -- Endothiapepsin in complex with fragment F2X-Entry H05, DMSO-free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.554, 73.106, 52.917 |
Unit cell angles | 90.00, 109.84, 90.00 |
Refinement procedure
Resolution | 42.850 - 1.184 |
R-factor | 0.1625 |
Rwork | 0.161 |
R-free | 0.17780 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.850 | 50.000 | 1.260 |
High resolution limit [Å] | 1.180 | 3.540 | 1.180 |
Rmerge | 0.102 | 0.053 | 2.438 |
Rmeas | 0.110 | 0.057 | 2.645 |
Total number of observations | 702969 | ||
Number of reflections | 104556 | 4031 | 16034 |
<I/σ(I)> | 8.66 | 34.84 | 0.56 |
Completeness [%] | 98.8 | 0.996 | 0.939 |
Redundancy | 6.719 | 6.81 | 6.12 |
CC(1/2) | 0.998 | 0.997 | 0.470 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG4000 |