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5QIV

Covalent fragment group deposition -- Crystal Structure of OUTB2 in complex with PCM-0102998

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-28
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.92819
Spacegroup nameP 1 21 1
Unit cell lengths47.240, 58.635, 49.790
Unit cell angles90.00, 116.18, 90.00
Refinement procedure
Resolution29.330 - 1.390
R-factor0.1387
Rwork0.137
R-free0.18380
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)1tff
RMSD bond length0.019
RMSD bond angle1.952
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0230)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.32029.3201.430
High resolution limit [Å]1.3906.2201.390
Rmerge0.0590.0320.603
Rmeas0.0700.0380.751
Rpim0.0370.0200.439
Total number of observations16098219619729
Number of reflections47767
<I/σ(I)>11.138.91.6
Completeness [%]97.698.295.3
Redundancy3.43.42.8
CC(1/2)0.9980.9980.643
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729316% PEG4K, 0.1M HEPES pH 7.0, 8% 2-propanol, 5 mM DTT

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PDB entries from 2024-05-15

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