5QIV
Covalent fragment group deposition -- Crystal Structure of OUTB2 in complex with PCM-0102998
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.240, 58.635, 49.790 |
Unit cell angles | 90.00, 116.18, 90.00 |
Refinement procedure
Resolution | 29.330 - 1.390 |
R-factor | 0.1387 |
Rwork | 0.137 |
R-free | 0.18380 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1tff |
RMSD bond length | 0.019 |
RMSD bond angle | 1.952 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.320 | 29.320 | 1.430 |
High resolution limit [Å] | 1.390 | 6.220 | 1.390 |
Rmerge | 0.059 | 0.032 | 0.603 |
Rmeas | 0.070 | 0.038 | 0.751 |
Rpim | 0.037 | 0.020 | 0.439 |
Total number of observations | 160982 | 1961 | 9729 |
Number of reflections | 47767 | ||
<I/σ(I)> | 11.1 | 38.9 | 1.6 |
Completeness [%] | 97.6 | 98.2 | 95.3 |
Redundancy | 3.4 | 3.4 | 2.8 |
CC(1/2) | 0.998 | 0.998 | 0.643 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 16% PEG4K, 0.1M HEPES pH 7.0, 8% 2-propanol, 5 mM DTT |