5QEM
PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_XST00000217b
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-09-25 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92819 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 89.651, 89.651, 106.437 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 62.725 - 1.754 |
| R-factor | 0.191 |
| Rwork | 0.190 |
| R-free | 0.21560 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.023 |
| RMSD bond angle | 1.973 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 62.726 | 62.726 | 1.860 |
| High resolution limit [Å] | 1.750 | 5.240 | 1.750 |
| Rmerge | 0.071 | 0.032 | 1.103 |
| Rmeas | 0.079 | 0.035 | 1.258 |
| Total number of observations | 488419 | ||
| Number of reflections | 95866 | 3591 | 15424 |
| <I/σ(I)> | 12.3 | 43.84 | 1.09 |
| Completeness [%] | 99.9 | 99.9 | 99.7 |
| CC(1/2) | 0.999 | 0.999 | 0.506 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 7.5 | 277 | well solution: 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |






