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5PAE

Crystal Structure of Factor VIIa in complex with (2S)-2-hydroxy-N-[[3-[5-hydroxy-4-(1H-pyrrolo[3,2-c]pyridin-2-yl)pyrazol-1-yl]phenyl]methyl]propanamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2008-05-26
DetectorPSI PILATUS 6M
Wavelength(s)1.000800
Spacegroup nameP 41 21 2
Unit cell lengths95.270, 95.270, 116.710
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.620 - 1.450
R-factor0.179
Rwork0.179
R-free0.18750
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.015
RMSD bond angle1.502
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.4.0077)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.63047.6301.490
High resolution limit [Å]1.4506.4801.450
Rmerge0.0670.0341.363
Rmeas0.0720.0371.450
Total number of observations790132
Number of reflections9478111696917
<I/σ(I)>15.3240.811.52
Completeness [%]99.495100
Redundancy8.34
CC(1/2)0.9990.9990.667
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.527716 mg/ml protein in 20mM Tris/HCl pH 8.4, 5 mM benzamidine, 0.1 M NaCl, 50 mM CaCl2 mixed 1+1 with 32-35% AMMONIUM SULPHATE, 2% PEG 4000, 0.1 M Bicine-NaOH pH 8.5, 15% glycerol

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