5OXG
Crystal structure of the ACVR1 (ALK2) kinase in complex with LDN-212854
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-12-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9762 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 85.860, 102.201, 177.300 |
Unit cell angles | 90.00, 93.96, 90.00 |
Refinement procedure
Resolution | 65.650 - 2.130 |
R-factor | 0.20736 |
Rwork | 0.206 |
R-free | 0.23243 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h9r |
RMSD bond length | 0.010 |
RMSD bond angle | 1.369 |
Data reduction software | iMOSFLM (7.2.1) |
Data scaling software | Aimless (7.0.044) |
Phasing software | PHASER (7.0.044) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.650 | 2.140 |
High resolution limit [Å] | 2.130 | 2.100 |
Rmerge | 0.077 | 0.539 |
Rmeas | 0.093 | 0.650 |
Rpim | 0.052 | 0.358 |
Number of reflections | 88737 | 4518 |
<I/σ(I)> | 8 | 1.9 |
Completeness [%] | 99.6 | 99.6 |
Redundancy | 3.1 | 3.1 |
CC(1/2) | 0.991 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 18% PEG8000 -- 0.2M calcium acetate -- 0.1M cacodylate pH 6.5 |