5OS9
Structure of the B3 DNA-Binding Domain of NGA1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-06-30 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9763 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 30.758, 151.179, 47.513 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 75.590 - 1.800 |
| R-factor | 0.1529 |
| Rwork | 0.148 |
| R-free | 0.19480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4lduA |
| RMSD bond length | 0.019 |
| RMSD bond angle | 1.530 |
| Data reduction software | XDS |
| Data scaling software | SCALA (3.3.20) |
| Phasing software | MoRDa (1.3.02) |
| Refinement software | PHENIX ((1.10_2155)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 75.590 | 1.864 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.019 | 0.106 |
| Number of reflections | 39391 | 2062 |
| <I/σ(I)> | 21.81 | 6.85 |
| Completeness [%] | 99.2 | 98 |
| Redundancy | 2 | 2 |
| CC(1/2) | 0.999 | 0.971 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | Reservoir solution: 0.1 M HEPES-NaOH pH 7.5, 0.2 M potassium sodium tartrate, 1.6 M potassium-sodium phosphate, 5% PEG 4000. Protein concentration: 7.1 mg/ml. Drop: 0.4 microL protein solution + 0.2 microL reservoir solution. |






