Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OOU

Designed Ankyrin Repeat Protein (DARPin) YTRL-1 selected by directed evolution against Lysozyme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2017-03-11
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97625
Spacegroup nameP 64 2 2
Unit cell lengths103.500, 103.500, 96.130
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution44.817 - 2.104
R-factor0.1864
Rwork0.185
R-free0.20630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5oos
RMSD bond length0.002
RMSD bond angle0.484
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]65.55765.5572.140
High resolution limit [Å]2.1045.7102.104
Rmerge0.1000.0542.485
Rmeas0.1030.0562.551
Rpim0.0240.0140.569
Total number of observations3439341638517894
Number of reflections18216
<I/σ(I)>16.540.51.4
Completeness [%]100.010098.9
Redundancy18.915.720
CC(1/2)0.9990.9990.475
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8.52981.5M AmSO4, 0.1M Tris pH=8.5, 12% glycerol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon