5OMC
Crystal structure of K. lactis Ddc2 N-terminus in complex with S. cerevisiae Rfa1 (K45E mutant) N-OB domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.99999 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.420, 94.590, 170.840 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.290 - 2.380 |
R-factor | 0.2036 |
Rwork | 0.201 |
R-free | 0.26110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5omb |
RMSD bond length | 0.010 |
RMSD bond angle | 1.130 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.450 |
High resolution limit [Å] | 2.380 | 2.380 |
Number of reflections | 21408 | 1199 |
<I/σ(I)> | 5.87 | 0.99 |
Completeness [%] | 92.1 | 69.9 |
Redundancy | 3.77 | 2.92 |
CC(1/2) | 0.993 | 0.355 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.2 M lithium sulfate monohydrate, 0.1 M Bis-Tris, 25% PEG 3,350 |