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5OJY

Co-complex structure of regulator protein 2 (PamR2) with pamamycin 607 from Streptomyces alboniger

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-01-13
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.9184
Spacegroup nameP 62 2 2
Unit cell lengths107.850, 107.850, 119.300
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.700 - 1.851
R-factor0.1832
Rwork0.182
R-free0.19600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ojx
RMSD bond length0.011
RMSD bond angle1.083
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.7.17)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.70046.7001.950
High resolution limit [Å]1.85010.0001.850
Rmerge0.0750.0291.588
Rmeas0.0301.625
Number of reflections354452885001
<I/σ(I)>28.898.362.24
Completeness [%]99.898.398.8
Redundancy21.717.26422.163
CC(1/2)1.0001.0000.760
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.1M CHES pH 8.8, 0.7 M tri-sodium citrate, 0.14M tri-lithium citrate with 5mg/ml-1 protein (preincubated with 0.5 mM Pam607 (1:1 disolved in DMSO:MetOH), 10min on ice)

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