5OJX
Crystal structure of regulator protein 2 (PamR2) from the pamamycin biosynthetic gene cluster of Streptomyces alboniger
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-01-13 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.918400 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 98.270, 56.030, 39.270 |
Unit cell angles | 90.00, 97.99, 90.00 |
Refinement procedure
Resolution | 38.889 - 2.100 |
R-factor | 0.2298 |
Rwork | 0.227 |
R-free | 0.27660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2y30 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.912 |
Data reduction software | XDS (20170615) |
Data scaling software | XSCALE (20170615) |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.889 | 38.889 | 2.200 |
High resolution limit [Å] | 2.100 | 10.000 | 2.100 |
Rmerge | 0.036 | 0.016 | 0.717 |
Rmeas | 0.041 | 0.019 | 0.816 |
Number of reflections | 12407 | 118 | 1614 |
<I/σ(I)> | 20.02 | 67.89 | 1.86 |
Completeness [%] | 99.6 | 93.7 | 100 |
Redundancy | 4.288 | 3.881 | 4.473 |
CC(1/2) | 1.000 | 1.000 | 0.708 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 5mg/mL PamR2 150 mM NaCl 722mM tri-Lithium citrate |