Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OHT

A GH31 family sulfoquinovosidase from E. coli in complex with aza-sugar inhibitor IFGSQ

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-12-12
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.92819
Spacegroup nameP 1
Unit cell lengths68.473, 86.269, 86.810
Unit cell angles100.76, 113.77, 97.14
Refinement procedure
Resolution44.620 - 1.870
R-factor0.1678
Rwork0.166
R-free0.20180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5aee
RMSD bond length0.019
RMSD bond angle1.702
Data reduction softwarexia2 (3.10)
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.6201.900
High resolution limit [Å]1.8701.870
Rmerge0.0380.797
Number of reflections1408296956
<I/σ(I)>14.81.2
Completeness [%]97.896.9
Redundancy3.53.6
CC(1/2)0.9990.622
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29325 MG/ML-1 PROTEIN IN 50 MM NAPO4 , PH6.5, AND 250 MM NACL BUFFER IS MIXED WITH EQUAL VOLUME OF PRECIPITANT COMPOSED OF 50-60% (V/V) 2-METHYL-2, 4-PENTANEDIOL, 0.1-0.15 M CACL2, AND 20 DEGREE

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon