5OH2
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Pyrrolidin-2-one (Butyrolactam)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-08 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.911, 59.686, 88.443 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.400 - 1.900 |
R-factor | 0.1789 |
Rwork | 0.177 |
R-free | 0.22474 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2V2Y |
RMSD bond length | 0.012 |
RMSD bond angle | 1.537 |
Data reduction software | XDS |
Data scaling software | XDS |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.400 | 2.010 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.050 | 0.490 |
Number of reflections | 24410 | 3836 |
<I/σ(I)> | 12.5 | 1.89 |
Completeness [%] | 98.4 | 96.7 |
Redundancy | 2.86 | 2.81 |
CC(1/2) | 1.000 | 0.790 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 0.1 M sodium acetate pH 4.6, 15 %(W/V) PEG 20000 |