5O96
Structure of the putative methyltransferase Lpg2936 from Legionella pneumophila in complex with the bound cofactor SAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-27 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.99999 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 104.482, 98.740, 225.783 |
Unit cell angles | 90.00, 91.76, 90.00 |
Refinement procedure
Resolution | 49.370 - 2.300 |
R-factor | 0.1849 |
Rwork | 0.182 |
R-free | 0.23610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5o95 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.005 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.400 | 2.360 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.174 | |
Number of reflections | 101902 | 5031 |
<I/σ(I)> | 4.3 | 1.2 |
Completeness [%] | 97.0 | 97.2 |
Redundancy | 3.9 | 4 |
CC(1/2) | 0.983 | 0.935 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 289 | Based on the C1 condition of the Morpheus screen 10% w/v PEG 20 000 20% v/v PEG MME 550, 0.03 M of each NPS 0.1 M MES/imidazole pH 6.5 |