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5O0N

Deglycosylated Nogo Receptor with native disulfide structure 4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-04-27
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.0
Spacegroup nameP 41
Unit cell lengths90.630, 90.630, 45.620
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution90.630 - 2.500
R-factor0.2201
Rwork0.219
R-free0.24790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ozn
RMSD bond length0.004
RMSD bond angle1.123
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.6302.610
High resolution limit [Å]2.5002.500
Number of reflections13084
<I/σ(I)>13.22.4
Completeness [%]100.0100
Redundancy7.47.6
CC(1/2)0.9980.704
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5291Co-crystallization trial with mouse Nogo54, an extracellular construct derived from the NgR ligand Nogo-A (UNIPROT Q99P72, residues 1025-1078). Nogo54 was purified in 150 mM NaCl, 20 mM HEPES pH 7.0 at a concentration of 3.3 mg/mL and mixed in a 1:1 molar ratio with Endo-Hf-deglycosylated NgRa at a concentration of 10 mg/mL. Crystals were grown in a condition of 0.2 M ammonium sulfate, 0.1 M Bis-Tris pH 6.5, 25% (w/v) PEG3350.

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