5O03
GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-32
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-07 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.965 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 109.660, 109.660, 268.320 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.041 - 2.194 |
R-factor | 0.1732 |
Rwork | 0.172 |
R-free | 0.19290 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.873 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.041 | 49.041 | 2.330 |
High resolution limit [Å] | 2.190 | 6.530 | 2.190 |
Rmerge | 0.059 | 0.036 | 0.773 |
Rmeas | 0.062 | 0.038 | 0.824 |
Number of reflections | 84293 | 3518 | 13258 |
<I/σ(I)> | 23.86 | 62.98 | 2.66 |
Completeness [%] | 99.8 | 99.4 | 98.9 |
Redundancy | 10.641 | 9.741 | 8.486 |
CC(1/2) | 0.999 | 0.999 | 0.925 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M magnesium formate |