5NV8
Structural basis for EarP-mediated arginine glycosylation of translation elongation factor EF-P
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-09-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.87290 |
Spacegroup name | I 4 |
Unit cell lengths | 131.680, 131.680, 46.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.556 - 2.294 |
R-factor | 0.292 |
Rwork | 0.289 |
R-free | 0.33940 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.664 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | CRANK2 |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.542 | 2.360 |
High resolution limit [Å] | 2.298 | 2.300 |
Rmerge | 0.130 | 0.590 |
Rmeas | 0.185 | 0.929 |
Number of reflections | 17539 | 1760 |
<I/σ(I)> | 7.73 | 1.87 |
Completeness [%] | 97.1 | 98.49 |
Redundancy | 3.5 | 3.3 |
CC(1/2) | 0.993 | 0.680 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 0.2M ammonium acetate, 0.1M bis-tris and 27% (w/v) PEG 3350 |