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5NV8

Structural basis for EarP-mediated arginine glycosylation of translation elongation factor EF-P

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2016-09-24
DetectorADSC QUANTUM 315r
Wavelength(s)0.87290
Spacegroup nameI 4
Unit cell lengths131.680, 131.680, 46.240
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.556 - 2.294
R-factor0.292
Rwork0.289
R-free0.33940
Structure solution methodSAD
RMSD bond length0.003
RMSD bond angle0.664
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareCRANK2
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.5422.360
High resolution limit [Å]2.2982.300
Rmerge0.1300.590
Rmeas0.1850.929
Number of reflections175391760
<I/σ(I)>7.731.87
Completeness [%]97.198.49
Redundancy3.53.3
CC(1/2)0.9930.680
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62770.2M ammonium acetate, 0.1M bis-tris and 27% (w/v) PEG 3350

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PDB entries from 2024-05-15

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