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5NV2

Human DNMT3B PWWP domain in complex with N-isopropyl-1,5-dimethylhexylamine (Metron S)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-12-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.978570
Spacegroup nameP 32 2 1
Unit cell lengths74.630, 74.630, 156.670
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.620 - 2.029
R-factor0.2032
Rwork0.201
R-free0.24050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3qkj
RMSD bond length0.008
RMSD bond angle1.102
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.6202.150
High resolution limit [Å]2.0292.030
Rmerge0.0420.870
Number of reflections334735331
<I/σ(I)>26.762.38
Completeness [%]99.999.2
Redundancy9.89.9
CC(1/2)1.0000.540
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.1 M MES,0.2 M Li2SO4, 23-33% PEG 3350

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