5NJF
E. coli Microcin-processing metalloprotease TldD/E (TldD H262A mutant) with pentapeptide bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9282 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 65.160, 174.480, 83.650 |
Unit cell angles | 90.00, 90.04, 90.00 |
Refinement procedure
Resolution | 65.160 - 1.420 |
R-factor | 0.1402 |
Rwork | 0.139 |
R-free | 0.17110 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5nj5 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.346 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.15) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.160 | 65.160 | 1.460 |
High resolution limit [Å] | 1.420 | 6.350 | 1.420 |
Rmerge | 0.084 | 0.042 | 1.543 |
Rmeas | 0.091 | 0.045 | 1.677 |
Rpim | 0.035 | 0.017 | 0.647 |
Number of reflections | 346357 | ||
<I/σ(I)> | 11.9 | ||
Completeness [%] | 99.0 | 99.7 | 98 |
Redundancy | 6.8 | 7.4 | 6.5 |
CC(1/2) | 0.998 | 0.998 | 0.440 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | NULL |