5NIJ
Crystal structure of arabidopsis thaliana legumain isoform gamma in two-chain activation state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-30 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 41 |
Unit cell lengths | 147.830, 147.830, 101.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 66.112 - 2.750 |
R-factor | 0.2155 |
Rwork | 0.214 |
R-free | 0.25230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fgu |
RMSD bond length | 0.003 |
RMSD bond angle | 0.714 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.860 | 2.830 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.098 | 0.770 |
Number of reflections | 56996 | |
<I/σ(I)> | 8.6 | 1.6 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 3.4 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M MES pH 6.5 and 1.6 M MgSO4 |