Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NII

Crystal structure of the atypical thioredoxin reductase TRi from Desulfovibrio vulgaris Hildenborough

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2013-12-07
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97625
Spacegroup nameI 2 2 2
Unit cell lengths66.387, 148.161, 152.886
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.480 - 2.000
R-factor0.1961
Rwork0.194
R-free0.22820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3fd8
RMSD bond length0.011
RMSD bond angle1.289
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 Overall
Low resolution limit [Å]47.480
High resolution limit [Å]2.000
Number of reflections92563
<I/σ(I)>16.24
Completeness [%]99.2
Redundancy3.67
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29312% PEG 3350, 100 mM BisTris pH 6.0

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon