5NFL
Crystal structure of YrbA from Sinorhizobium meliloti in complex with cobalt.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM30A |
| Synchrotron site | ESRF |
| Beamline | BM30A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-11-15 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.979760 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 30.802, 31.944, 62.741 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.370 - 1.903 |
| R-factor | 0.1335 |
| Rwork | 0.133 |
| R-free | 0.14990 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5nfk |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.288 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 31.940 | 2.010 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rmerge | 0.142 | 0.447 |
| Rmeas | 0.153 | 0.487 |
| Rpim | 0.054 | 0.186 |
| Number of reflections | 5140 | |
| <I/σ(I)> | 15 | 5.7 |
| Completeness [%] | 98.4 | 89.3 |
| Redundancy | 7.5 | 6.3 |
| CC(1/2) | 0.995 | 0.892 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 277 | 1.0 M lithium sulfate 0.01 M cobalt chloride 0.1 M Tris-HCl, pH 8.5 |
