Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5N41

Archaeal DNA polymerase holoenzyme - SSO6202 at 1.35 Ang resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2013-12-10
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97949
Spacegroup nameP 32 2 1
Unit cell lengths61.752, 61.752, 35.363
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.876 - 1.351
R-factor0.1622
Rwork0.160
R-free0.19810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5n35
RMSD bond length0.009
RMSD bond angle0.954
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575-000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.9001.400
High resolution limit [Å]1.3501.350
Rmerge0.0460.339
Number of reflections165151178
<I/σ(I)>28.23.1
Completeness [%]95.268.6
Redundancy4.83
CC(1/2)0.839
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5294.15OD280=17.7 mg/ml in 20 mM HEPES pH 7.5, 0.3 M NaCl, 1 mM MgCl2 and 1 mM b-ME mixed with 0.1 M Potassium thiocyanate and 30% w/v Polyethylene glycol monomethyl ether 2000 (Hampton Index)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon