5MYK
Structure of Pyroglutamate-Abeta-specific Fab c#17 in complex with murine Abeta-pE3-18PEGb
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-28 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9184 |
Spacegroup name | P 1 |
Unit cell lengths | 40.915, 42.943, 57.979 |
Unit cell angles | 83.85, 83.34, 90.30 |
Refinement procedure
Resolution | 19.326 - 1.600 |
R-factor | 0.1745 |
Rwork | 0.173 |
R-free | 0.20980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5my4 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.857 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.5.2) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.326 | 30.000 | 1.700 |
High resolution limit [Å] | 1.600 | 20.000 | 1.600 |
Rmerge | 0.029 | 0.413 | |
Rmeas | 0.042 | 0.584 | |
Total number of observations | 96945 | ||
Number of reflections | 48637 | 8019 | |
<I/σ(I)> | 16.33 | 1.98 | |
Completeness [%] | 94.5 | 93.7 | |
Redundancy | 1.993 | 1.987 | |
CC(1/2) | 0.999 | 0.751 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 286 | 0.1M HEPES Sodium Salt 0.2M Calcium Acetate 18% w/v PEG 8000 |